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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs60147402 chr5:49526628 T/A LOC647121 chr1:121260910-121313686:+ -0.37 -7.86 2.52E-14 Box Plot
THCA rs601551 chr11:77554821 G/A INTS4L1 chr7:64601603-64694600:+ 0.44 8.09 5.12E-15 Box Plot
THCA rs60175199 chr2:132257689 A/G CCDC74B chr2:130896860-130902707:- 0.4 7.07 5.45E-12 Box Plot
THCA rs60176945 chr8:11796674 T/C SGK223 chr8:8175258-8244008:- -0.47 -8.73 4.18E-17 Box Plot
THCA rs60201031 chr7:66328183 T/C CCT6P1 chr7:65216129-65228341:+ 0.44 6.72 5.22E-11 Box Plot
THCA rs60249787 chr2:132213905 T/A CCDC74B chr2:130896860-130902707:- 0.38 6.79 3.3E-11 Box Plot
THCA rs60249823 chr2:132241162 A/AC TUBA3E chr2:130949316-130956034:- 0.54 6.23 1.0E-9 Box Plot
THCA rs60268331 chr2:132261429 T/G CCDC74B chr2:130896860-130902707:- 0.41 7.26 1.56E-12 Box Plot
THCA rs60268463 chr6:26696630 G/GC ZNF322B chr9:99957633-99961910:- 0.69 13.21 3.54E-34 Box Plot
THCA rs60277528 chr5:151683564 G/T FILIP1L chr3:99548985-99833357:- 0.22 6.22 1.1E-9 Box Plot
THCA rs60278284 chr8:10003210 G/C SGK223 chr8:8175258-8244008:- 0.34 6.14 1.73E-9 Box Plot
THCA rs60293935 chr10:51823487 C/T FAM21B chr10:47894023-47949412:+ 0.58 7.62 1.38E-13 Box Plot
THCA rs60309927 chr8:11072270 CT/C SGK223 chr8:8175258-8244008:- 0.45 7.85 2.78E-14 Box Plot
THCA rs6033491 chr20:1320257 G/T FKBP1AP1 chr19:58337829-58338146:- 0.42 7.62 1.41E-13 Box Plot
THCA rs6033557 chr20:1348542 A/G FKBP1AP1 chr19:58337829-58338146:- 0.64 10.93 5.78E-25 Box Plot